CDS

Accession Number TCMCG057C38402
gbkey CDS
Protein Id XP_018446140.1
Location join(1093083..1093331,1093333..1094146,1094408..1094486,1094615..1094682,1094977..1095127,1095225..1095739,1095840..1096007,1096096..1097747)
Gene LOC108817828
GeneID 108817828
Organism Raphanus sativus

Protein

Length 1231aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018590638.1
Definition PREDICTED: LOW QUALITY PROTEIN: probable lysine-specific demethylase ELF6 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Small domain found in the jumonji family of transcription factors
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006482        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008214        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009741        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016577        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032451        [VIEW IN EMBL-EBI]
GO:0032452        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0033169        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048577        [VIEW IN EMBL-EBI]
GO:0048579        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048586        [VIEW IN EMBL-EBI]
GO:0048587        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070076        [VIEW IN EMBL-EBI]
GO:0070988        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000242        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTATCAATGTCGAAATCCCCAATTGGCTAAAGGCCATGCCTTTGGCACCCGTCTTCAGACCCACGGACACCGAGTTCGCAGATCCCATTGCGTACATCTCGAAGATCGAGAAAGAGGCCAGCGCCTTTGGGATCTGCAAGATCGTTCCTCCCATACCCAAGCCATCGAAAAAGTACGTTTTTTGCAACTTGAACAAGTCGCTTCTGAGGTGTCCTGAGCTGGCTTCTGGCGTGGACGTCTCGAAGTTCCTTCGTCAAGAGGATAGAGCTGTGTTCACCACTAGGCAGCAGGAGTTAGGACAGGCTAGGAAAAAGAGCAAAGGAGGAGGAGGAGGAGGAGAGGGCGGGGGTGGTGTTAAGCAGGTTTGGCAGAGTGGTGGCGTGTATACGTTGGAGCAGTTTGAGTCCAAGTCCAAGGCTTTTTATAAAAGTCAGTTAGGGACGGTTAAAGAAGTGTCGCCGGTTGTGGTTGAGGCGTTGTTCTGGAAAGCGGCTTCGGAGAAGCCTATATATATAGAGTATGCGAATGATGTGCCTGGCTCGGCCTTTGGTGAGCCGGAGGGTCATTTCAGGCATTTCCGGCAGAGGAAGAGGAGAGGGAGAGGATTTTATCAGAGGAAGGCAGAGGATAGTCAAGAACCATCCTGTAAGAACGGTGAGGAGACATTGCCTGAGGTGGCAAAGTCATCTCTTGCTTCTCCAAGTTTATTATCTCAAGATCAGTCCAAGAAGAAGGACGTGGATGTTGTTGATGAAATGGAAGGTACTGCAGGCTGGAAGCTTTCCAACAGTTCGTGGAACCTTCAGATGATCGCACGTTCACCTGGCTCTGTCACGCGCTTCATGCCGGATGACATACCTGGTGTTACATCTCCCATGGTTTATATCGGTATGTTGTTCAGCTGGTTTGCCTGGCACGTTGAGGACCATGAGCTCCACAGTATGAATTATCTTCACACTGGCTCGCCAAAGACTTGGTACGCTGTCCCTGGCGATTATGCGCTCGACTTTGAAGAGGTTATCCGTAAGAATTCTTATGGCAGAAACCTTGATCAACTGGCTGCTCTCACACAACTAGGCGAAAAGACAACTCTTGTATCACCTGAGATGATAGTTTCATCCGACATTCCCTGCTGTAGGTTGGTACAAAATCCTGGTGAATTTGTGGTTACTTTTCCAAGGTCTTATCATGTAGGATTCAGCCACGGTTTTAACTGTGGCGAAGCCGCTAATTTTGGAACTCCACAGTGGCTCAACGTAGCTAAGGAAGCTGCTGTGCGTAGGGCAGCCATGAATTATCTCCCCATGTTGTCCCATCAGCAGCTTCTATATCTCTTGACCATGTCCTTTGTTTCAAGAGTGCCACGATCGTTGCTACCAGGTGGTCGTAGCTCCCGGCTGAGAGATCGACAGAGAGAAGAAAGGGAGTTCCTTGTGAAAAAAGCTTTTGTAGAAGATATATTGAACGAAAACAAGAATCTGTCTGTTCTACTTGGAGAACCGGGCTCTCGTTTGGTGATGTGGGACCCTGATTTACTTCCACGCCATAGCGCATTGGCTCTTTCAGCTGCCGGGGTTGATGCTACTACTTCTGCTGTTTCATGTCCAGCAGAGGCCAAAAATGAAGTTGAGAACGGTCATTCTGGAACGCAGAATGAAGAGAAGACTACTCTTTTAGAGGAATTAAGTTTGTTCATGGAGAAGCTGAAAGATGTGTACTACGACGACGATGATGGTCAGCTTAATGATTTCCAAATCGATTCTGGAACCTTGCCATGTGTGGCGTGTGGCGTTCTTGGCTTCCCCTTTATGTCTGTGGTACAGCCTTCTGAAAATGCATTAAAAGATCTCTCAGAGATACAAGAAGAGATAGATGCTCAAGAAATTACAGCACAGTCATCAGAAAAGACTAACAACAGTGAATGGAACACGTCATCCGGATATATAAGACCTCGCATTTTCTGCCTCGAGCACACTATTGAACTTCAGAGACTGCTGCAGTCAAGAGGTGGACTGAAGTTCCTTGTTATTTGCCATAAAGACTTTCAAAAATTTAAGGCGCATGCGGCTATAGTGGCAGAGGAAGTGAAAGTCCCTTTCAGATATGATGATGTCCTGTTAGAGAGTGCATCTAAAGAAGAGCTGAGTCTGATTGATCTTGCAATTGAAGGTGAAGAAAACAACGAACACGGCGCAGACTGGACCTCAAAACTTGGCATCAACTTACGGTACTGTGTTAAAGTGAGGAAAAATTCCGCTAACAATAAGATTCAGCATGCACTGTCGCTAGGTGGCTTGTTCTCCGACACAAGCCACATGTTAGATATGTCAACTATCAAATGGCTGCAGCGGAAATCACGCTCAAAAGCTAAACCATGCTCTACCTCATGTTTCACACCTCGTGAACATCTTGAAGTAAAAGCAGATAGAAAACTGGGGGAGAAAGAAGAAGATGAATCACAAGCCGGAAGAAAGGAAGAAAAGATCATCCAGTACTCGAGAAAGAAAAAGTTGAATCCCAATGCCAATAGGTCAGATCATGGGAGGGCGGTTTATTCTGAGATGAACATTGGGATTGGTGACTCTGCTGATCTAACTTCCGTAACCAGAGAGCACCAAGGACACTCTATGACCAGTGATAATAACAATGGCTCGAATTCAGATAGTCATGTTGTGGACCTTGTTGCAAGTCCGACCATGCTTGCTTCTACAGTCGATAATCATAATGGTACTCCGATGAAGATGTGTGGTGGTGTTGATGAAGCGGCTGAAATGAGCGGCCAAGAGTTCAAAGAACTTAGATCTACTAACGCTAACATTGAGGAGGAAGAGCAATCACAGGTGGTGCAACCTACCAATAGAGAAGCTGTATCCGAAAATATTATGCACACTGAGCAAGAAGAAGAGCAAGCACATTCTTCAGCTCAACTGGGTTTAGAAGTTCCTGAAACTAGCATTGCCAATGAGAAGATAGTCGTGGACATGGTCCGTGATGATGAACCTCTGGCAAGCAACGGTGATGAAGCTTCTTCAAGTGGCTTCCAAGCTGCAGATAATCAAAATAGCGTGAAGAGCGTGGTTGGAAGCTCAGGAAACACCGAGGTTATCGAGGCAAAGAAGAAGCGTAAACTAGAATTGGACAGTCCAGAGAGTAGCATTGGTTTCATAAAGAGCCCTTGTGAAGGGTTGAGGTCAAGGGGTAAGAGGAAAGTGACGTGCGAAGCTTCATTCGATCTCAATGAAGCGAACGATGAAGAGAAGAAGAAACACACTGCTAAAAGGCTCAAGAAAACTCCAACTACTCGCTCGGGGACTCATGGCCAAGAAGAAGCCTCCACGGCAACTCACCACAACCGTTGTTACCTGGAGGGATGCAAGATGACTTTCAAGAGCAAAACGGACTTAGCAGCTCACAAGAGAAACCGCTGCACGCACGAAGGGTGCGGGAAGAAGTTCAGGGCTCACAAGTATCTGGTGCTTCACCAACGTGTTCACAACGACGAAAGACCGTTCGTGTGCCCTTGGAAAGGGTGTACCATGAATTTCAAATGGCAATGGGCGAGGACTGAGCATTTGCGTCTGCACACTGGGGAACGACCGTACAAATGCAAGGTGGATGGGTGTGGACTGTCGTTTAGGTTTGTGTCGGATTATAGCCGCCACAGACGGAAGACGGGGCATTATGTGACATAG
Protein:  
MGINVEIPNWLKAMPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIVPPIPKPSKKYVFCNLNKSLLRCPELASGVDVSKFLRQEDRAVFTTRQQELGQARKKSKGGGGGGEGGGGVKQVWQSGGVYTLEQFESKSKAFYKSQLGTVKEVSPVVVEALFWKAASEKPIYIEYANDVPGSAFGEPEGHFRHFRQRKRRGRGFYQRKAEDSQEPSCKNGEETLPEVAKSSLASPSLLSQDQSKKKDVDVVDEMEGTAGWKLSNSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPGDYALDFEEVIRKNSYGRNLDQLAALTQLGEKTTLVSPEMIVSSDIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRSLLPGGRSSRLRDRQREEREFLVKKAFVEDILNENKNLSVLLGEPGSRLVMWDPDLLPRHSALALSAAGVDATTSAVSCPAEAKNEVENGHSGTQNEEKTTLLEELSLFMEKLKDVYYDDDDGQLNDFQIDSGTLPCVACGVLGFPFMSVVQPSENALKDLSEIQEEIDAQEITAQSSEKTNNSEWNTSSGYIRPRIFCLEHTIELQRLLQSRGGLKFLVICHKDFQKFKAHAAIVAEEVKVPFRYDDVLLESASKEELSLIDLAIEGEENNEHGADWTSKLGINLRYCVKVRKNSANNKIQHALSLGGLFSDTSHMLDMSTIKWLQRKSRSKAKPCSTSCFTPREHLEVKADRKLGEKEEDESQAGRKEEKIIQYSRKKKLNPNANRSDHGRAVYSEMNIGIGDSADLTSVTREHQGHSMTSDNNNGSNSDSHVVDLVASPTMLASTVDNHNGTPMKMCGGVDEAAEMSGQEFKELRSTNANIEEEEQSQVVQPTNREAVSENIMHTEQEEEQAHSSAQLGLEVPETSIANEKIVVDMVRDDEPLASNGDEASSSGFQAADNQNSVKSVVGSSGNTEVIEAKKKRKLELDSPESSIGFIKSPCEGLRSRGKRKVTCEASFDLNEANDEEKKKHTAKRLKKTPTTRSGTHGQEEASTATHHNRCYLEGCKMTFKSKTDLAAHKRNRCTHEGCGKKFRAHKYLVLHQRVHNDERPFVCPWKGCTMNFKWQWARTEHLRLHTGERPYKCKVDGCGLSFRFVSDYSRHRRKTGHYVT